Supporting material for Darling, Mau, Perna 2010 "progressiveMauve: Multiple genome alignment with gene gain, loss, and rearrangement".
This archive contains a 41-way whole genome multiple alignment of Escherichia and Shigella species computed by progressiveMauve. Some of the genomes are unfinished draft sequences. The main alignment file is called newbugs_bb and is in the XMFA alignment format. Genome data is included in GenBank flat file format where available, for some organisms it is in FastA format.